Courses

In higher education and research, the topics of open science and research data management have gained interest. This module stimulates the use of open research data in teaching, thus f...

In this course for library staff at KU Leuven, participants will be introduced to the basics of Open Science.

After completion of the course, participants will be able to:

...

In this course you'll learn how to go about assessing the FAIRness of research data using freely accessible tools and resources. This course will:

• introduce you ...

(This course about Data management plans in Horizon 2020 will be offered in Portuguese)

Se gostaria de saber mais sobre os planos de gestão de ...

Are you participating in a H2020 funded project? Would you like to know more on how to comply with the H2020 Open Access mandate?

Join in this moderated Course on Open Access...

In this moderated course you will learn how to reuse the FOSTER toolkit on any other context like the website or the Learning Management System (LMS) of your institution.

The Open Scie...

Licensing your research outputs is an important part of practicing Open Science. In this course, you will:

• know what licenses are, how they work, and how to apply them&nbs...

This course helps you to understand open business models and responsible research and innovation (RRI) and illustrates how these can foster innovation. By the end of the course, you will:

This course introduces you to open peer review (OPR), an emerging practice which is gaining momentum as part of Open Science. Upon completing this course, you will:

• understand ...

This course shows you how sharing preprints can improve your research and support Open Science. By the end of the course, you will:

• know what preprints are
• be able t...

This course helps you to become skilled in Open Access (OA) publishing in the context of Open Science. By the end of the course, you will:

• understand how to publish your work o...

This course covers data protection in particular and ethics more generally. It will help you understand the basic principles of data protection and introduces techniques for implementing data pr...

This course introduces Open Source Software (OSS) management and workflow as an emerging but critical component of Open Science. The course explains the role of software sharing and sustainabili...

Data-driven research is becoming increasingly common in a wide range of academic disciplines, from Archaeology to Zoology, and spanning Arts and Science subject areas alike. To support good rese...

This course introduces some practical steps toward making your research more open. We begin by exploring the practical implications of open research, and the benefits it can deliver for research...

This introductory course will help you to understand what open science is and why it is something you should care about. You'll get to grips with the expectations of research funders and will le...

The Freeling component provides basic language analysis functionalities (tokenization, lemmatization, Pos Tagging and dependency parsers.) for the variety of languages that Freeling includes (En...

The objective of this component is to scan a tokenized text to detect entries in BabelNet in the input document. This component is the base of entity linking and word sense disambiguation as it ...

This tutorial includes three parts that describe how to use the Wheat Phenotypic Information Extractor and the two end-user applications, WheatIS and AlvisIR, that integrates its results for the...

The objective of this tutorial is to showcase how Social Science researchers can take full advantage of the OpenMinTeD TDM platform for Detecting and Linking Variables in Scientific Publications...

This tutorial describes how to use TDM to build a Recommender system for scholarly resources and utilise OpenMinTed platform to build and annotate corpuses for this purpose.

This tutorial explains how to use the Bio Term Hub, an aggregator of biomedical terminologies sourced from manually curated databases, to create a terminology suited to the users need....

This tutorial walks users through the simple process of creating a workflow in the OpenMinTeD platform that allows them to identify acknowledged projects (i.e. funding information) from scientif...

This tutorial walks users through the simple process of creating a workflow in the OpenMinTeD platform that allows them to extract links to DataCite (https://www.datacite.org) - mainly citations...

This tutorial will users through the simple process of creating a workflow in the OpenMinTeD platform that allows them to perform content-based document classification on scientific publications...

This tutorial is made up of two parts:
Part I is the OpenMinTED guide to create a workflow that reads from a data source and annotate articles related to chronic liver diseases.
Pa...

This tutorial is made up of two parts:
Part I is the OpenMinTED guide to create a workflow that reads from a data source and annotate articles related to chronic liver diseases.
Pa...

In this course we will explain how IXA pipes have been integrated as Docker images in the OpenMinTeD (OMTD) platform and how can they be used (http://ixa2.si.ehu.es/ixa-pipes/).

The ai...

This tutorial focuses on using the Docker image to annotate raw text files. It shows how to install the docker system on a machine, how to pull the UPFMT image and how to pass the input/output p...

This tutorial focuses on using the code directly on a host machine. It gives access to the code (Python) + models and shows the user how to run the code from the console. Also, all the steps nee...

In the current context of scientific information overload in which new knowledge is created at a rapid pace, we propose to develop text summarization services for automatically identifying the m...

The objective of this tutorial is to showcase how the Neuroscience use case available at the OpenMinTeD platform can facilitate the curation of neuroscience entities from the literature with the...

The objective of this tutorial is to showcase the use case of “Extract Metabolites and their Properties and Modes of Actions”. The tutorial describes step-by-step how to create a workflow in the...

This tutorial explains how to use the “Arabidopsis Gene Regulation Extractor” application available from the OpenMinTeD platform. It also explains the scientific issues it addresses, and how res...

This tutorial explains how to use the “Habitat-Phenotype Relation Extractor for Microbes” application available from the OpenMinTeD platform. It also explains the scientific issues it addresses,...

The OpenMinTeD project offers an integrated registry of text mining components alongside a powerful corpus builder. The platform can be used to identify a set of documents of interest and then r...

In this tutorial we describe a way to wrap a command line tool (NLProt) as web service and share it through the OpenMinTeD platform. 

The Unstructured Information Management Architecture (UIMA) is a widely used software framework and specification to create multi modal analysis systems, in particular for Natural Language Proce...

The purpose of this tutorial is to explain how to add annotation resources to the OMTD platform. In this context, annotation resources mean ontologies or vocabularies selected in different ontol...

BO-LSTM is a model based on biomedical ontologies and Long short-term memory networks. T...

The objective of this component is to scan a tokenized text to detect entries in BabelNet in the input document. This component is the base of entity linking and word sense disambiguation as it ...

Abbreviations and basic subject-object relations can be valuable data to understand the context and meaning of text passages. This tutorial explains how to use the two tools Ab3P and OpenSesamIE...

A software component for vine/grape variety named entity extraction and clustering

Tutorial on Text Mining over Viticulture Bibliographic Data